PI Publications
- 2025A feedforward loop between ACLY and MYC supports T-ALL progression in vivo
Victoria da Silva-Diz, Amartya Singh, Maya Aleksandrova, Oekyung Kim, Christopher Thai, Olga Lancho, Patricia Renck Nunes, Hayley Affronti, Alexia Martínez de Paz, Steven Z Josefowicz, Xiaoyang Su, Kathryn E Wellen, Daniel Herranz Blood Neoplasia, 100069, 2025
- 2024Feature selection followed by a novel residuals-based normalization that includes variance stabilization simplifies and improves single-cell gene expression analysis
Amartya Singh, Hossein Khiabanian BMC Bioinformatics, 25 (1), 248, 2024
- 2023A therapeutically targetable NOTCH1-SIRT1-KAT7 axis in T-cell leukemia
Olga Lancho, Amartya Singh, Victoria da Silva-Diz, Maya Aleksandrova, Jesminara Khatun, Luca Tottone, Patricia Renck Nunes, Shirley Luo, Caifeng Zhao, Haiyan Zheng, Eric Chiles, Zhenyu Zuo, Pedro P Rocha, Xiaoyang Su, Hossein Khiabanian, Daniel Herranz Blood Cancer Discovery, 4 (1), 12-33, 2023
- 2021Cilium Expression Score Predicts Glioma Survival
Srinivas Rajagopalan, Amartya Singh, Hossein Khiabanian Frontiers in Genetics, 12, 758391, 2021
A novel and highly effective mitochondrial uncoupling drug in T-cell leukemiaVictoria da Silva-Diz, Bin Cao, Olga Lancho, Eric Chiles, Amer Alasadi, Maya Aleksandrova, Shirley Luo, Amartya Singh, Hanlin Tao, David Augeri, Sonia Minuzzo, Stefano Indraccolo, Hossein Khiabanian, Xiaoyang Su, Shengkan Jin, Daniel Herranz Blood, 138 (15), 1317-1330, 2021
Gene expression of adipokines and adipokine receptors in the tumor microenvironment: Associations of lower expression with more aggressive breast tumor featuresAdana AM Llanos, Song Yao, Amartya Singh, John B Aremu, Hossein Khiabanian, Yong Lin, Coral Omene, Angela R Omilian, Thaer Khoury, Chi-Chen Hong, Shridar Ganesan, David J Foran, Michael J Higgins, Christine B Ambrosone, Elisa V Bandera, Kitaw Demissie Breast cancer research and treatment, 185, 785-798, 2021
A Tumor Suppressor Enhancer of PTEN in T-cell development and leukemiaLuca Tottone, Olga Lancho, Jui-Wan Loh, Amartya Singh, Shunsuke Kimura, Juliette Roels, Anna Kuchmiy, Steven Strubbe, Matthew A Lawlor, Victoria da Silva-Diz, Shirley Luo, Stéphanie Gachet, Carlos A García-Prieto, Rico Hagelaar, Manel Esteller, Jules PP Meijerink, Jean Soulier, Tom Taghon, Pieter Van Vlierberghe, Charles G Mullighan, Hossein Khiabanian, Pedro P Rocha, Daniel Herranz Blood Cancer Discovery, 2 (1), 92-109, 2021
- 2020Tissue- and development-stage-specific mRNA and heterogeneous CNV signatures of human ribosomal proteins in normal and cancer samples
Anshuman Panda, Anupama Yadav, Huwate Yeerna, Amartya Singh, Michael Biehl, Markus Lux, Alexander Schulz, Tyler Klecha, Sebastian Doniach, Hossein Khiabanian, Shridar Ganesan, Pablo Tamayo, Gyan Bhanot Nucleic Acids Research, 48 (13), 7079-7098, 2020
- 2019TuBA: Tunable biclustering algorithm reveals clinically relevant tumor transcriptional profiles in breast cancer
Amartya Singh, Gyan Bhanot, Hossein Khiabanian GigaScience, 8 (6), giz064, 2019
- 2017Gamma Secretase Inhibition by BMS-906024 Enhances Efficacy of Paclitaxel in Lung Adenocarcinoma
Katherine M Morgan, Bruce S Fischer, Francis Y Lee, Jamie J Shah, Joseph R Bertino, Jeffrey Rosenfeld, Amartya Singh, Hossein Khiabanian, Sharon R Pine Molecular cancer therapeutics, 16 (12), 2759-2769, 2017
- 2016The Modular Adaptive Ribosome
Anupama Yadav, Aparna Radhakrishnan, Anshuman Panda, Amartya Singh, Himanshu Sinha, Gyan Bhanot PLoS One, 11 (11), e0166021, 2016